PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.F01824.1.p

Common Name

EUGRSUZ_F01824, LOC104448967

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 305aa MW: 32464.6 Da PI: 4.544

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.F01824.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.2e-10	138	188	2	52
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++k+ +r +NR AA rsR+RKka ++ Le k+k Le+e ++L l+ Eucgr.F01824.1.p 138 PASKKIKRQLRNRDAAVRSRERKKAFVKDLEVKSKYLEGECRRLGRLLQCV 188 689*************************************99887666555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.4E-6	137	201	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-8	139	196	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.645	139	196	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.19E-10	141	199	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.0E-10	141	201	No hit	No description
CDD	cd14704	2.66E-15	142	193	No hit	No description
PROSITE pattern	PS00036	0	144	159	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence Send to blast
MEDLELHMED DDVMAHIDLD GFFGDIPDAG DVIGACSSAN GSSSSPDSGL SWFDEIENIL 60 MKDDEDGGVV GGGIRADSSQ EFCDRFLADV LVDSPGDGSA VIAGDGSGDK EEPGSSDDGG 120 VEAAKVDGAD GGGEAYDPAS KKIKRQLRNR DAAVRSRERK KAFVKDLEVK SKYLEGECRR 180 LGRLLQCVMA ENQALRFNLQ NSASGASVAK QESAVLSEPL PLGSLFWFLC ITCLFTLPPP 240 LLLALEAVLR ENSGKGNLKP LAAPRGARSE MFGSCGVQTL DKSRRYKALR TKMKAGFLLP 300 RVLA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.F01824.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010061241.1	0.0	PREDICTED: bZIP transcription factor 60
TrEMBL	A0A059BPY3	0.0	A0A059BPY3_EUCGR; Uncharacterized protein
STRING	XP_010061241.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4634	28	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	1e-17	basic region/leucine zipper motif 60

Link Out ? help Back to Top
Phytozome	Eucgr.F01824.1.p
Entrez Gene	104448967