PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02138.1.p
Common NameEUGRSUZ_F02138
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 193aa    MW: 21184.3 Da    PI: 10.1711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02138.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.22.9e-13551354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r+h+e+ErrRR+riN  +++Lr+llP+       K++Ka+ L ++v+ +k+L
  Eucgr.F02138.1.p  5 RSHKEAERRRRQRINAHLSTLRSLLPST-----SKMDKASLLAQVVHRVKKL 51
                      78*************************7.....6************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.51251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-11551IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.99E-11556No hitNo description
Gene3DG3DSA:4.10.280.104.9E-13555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-13558IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.1E-12857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550211.3E-593165No hitNo description
Gene3DG3DSA:3.30.70.2603.6E-596164No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MTASRSHKEA ERRRRQRINA HLSTLRSLLP STSKMDKASL LAQVVHRVKK LRCQVADVAR  60
RDGPACLCPE LPGPLPSESD EASLSRCSGE EGLVEATVCC DDRPSLNRDL GQVVRAFGAR  120
VVRAEMATLA GRTRCVLRIK WAGRESEFGG LKRALRMVME NRALDCGPDR VAVGDKRTRA  180
YSSIDTGVDD RL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02138.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064697.21e-135PREDICTED: putative transcription factor bHLH107
TrEMBLA0A059BQQ81e-134A0A059BQQ8_EUCGR; Uncharacterized protein
STRINGXP_010064697.11e-134(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1885867
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.13e-21bHLH family protein