PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F03499.1.p
Common NameEUGRSUZ_F03499, LOC104450262
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 226aa    MW: 24196.3 Da    PI: 10.9769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F03499.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.13e-153484155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++y+GVr +k+ gr+ AeIrdp   g +k ++lg+fg++eeAa+a +a + +++g
  Eucgr.F03499.1.p 34 PRYRGVR-RKSLGRYTAEIRDP---GTKKLVRLGTFGSPEEAARAFDAKAVAFRG 84
                      68****9.6779*********8...325********************9988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.2E-83481IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-173593IPR016177DNA-binding domain
SMARTSM003801.4E-233598IPR001471AP2/ERF domain
PROSITE profilePS5103218.3343592IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-223592IPR001471AP2/ERF domain
CDDcd000186.59E-213594No hitNo description
PRINTSPR003674.3E-73647IPR001471AP2/ERF domain
PRINTSPR003674.3E-77494IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MKRGRCAAAA AKREAAEIAP PPVPHAAAAA AAEPRYRGVR RKSLGRYTAE IRDPGTKKLV  60
RLGTFGSPEE AARAFDAKAV AFRGVKARTN FPVAPSSFPP AASRDLRAPL IESRKFGRRG  120
ARDLRGEHHD VSPQRPTSSS LSSTVVSSSG PRPSPPETAK RRTRTPPPPP PPPEDCRSGC  180
GSSSTVIDDE GEDFASSSRR EPLPFDLNLL PPPEIDDFQF TSLRL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F03499.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063046.11e-155PREDICTED: ethylene-responsive transcription factor 3
TrEMBLA0A059BW881e-154A0A059BW88_EUCGR; Uncharacterized protein
STRINGXP_010063046.11e-155(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-13ERF domain protein 12