PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F03752.1.p
Common NameEUGRSUZ_F03752, LOC104450474
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 428aa    MW: 47452.1 Da    PI: 9.0548
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F03752.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05204226223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +CpdCg+ F  ++nL+ H+ + H
  Eucgr.F03752.1.p 204 SCPDCGEIFMKPDNLELHLAVrH 226
                       8*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280203226IPR007087Zinc finger, C2H2
SuperFamilySSF563991.73E-20228426No hitNo description
Gene3DG3DSA:3.90.228.101.4E-11229425IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MAKPRISRKP QETHKTESKD LQKPEKSSSW TVVRSFLSFK HLQTPEQQPL EPDNKQQKQQ  60
KQQNQKQQQE QVAVVEESSR KCKKMKCSGS LCSNTKVMQK PSEVVTPEAL KRRSSMGSFS  120
GSSNNTNHSS SSSRSMKVPL PELNGVVPSA TSSSLSVSSN GSSFGGSLRG MPFRRFSGCY  180
ECRMVVDPVL GFTRDPSLRS TICSCPDCGE IFMKPDNLEL HLAVRHAVSE LGPEDTSKNI  240
VEIIFQSSWL KKQTPVCKID RILKVHNTQK TISKFEEYRD SIKAKATKKN PRCIADGNEL  300
LRFHCTMFSC SLGLDGSSNL CNSIPQCNVC NIIRNGFKVG EEGILTTATS GRAHDNASLV  360
MKTEDDETRA MLVCRVIAGR VKKNMEGSME EYDSAAGACG LYSNLDELYV FNPRAILPCF  420
VVIYRGY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F03752.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063350.10.0PREDICTED: uncharacterized protein LOC104450474
TrEMBLA0A059BWS30.0A0A059BWS3_EUCGR; Uncharacterized protein
STRINGXP_010063350.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19162880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-101C2H2-like zinc finger protein