PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F04365.1.p
Common NameEUGRSUZ_F04365
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 193aa    MW: 20412.7 Da    PI: 4.1649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F04365.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.34.6e-142441055
               AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++++g
  Eucgr.F04365.1.p  2 RSWGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCIKG 44
                      57**********9...336***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.307152IPR001471AP2/ERF domain
SMARTSM003806.2E-26158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-25153IPR001471AP2/ERF domain
CDDcd000183.14E-13154No hitNo description
SuperFamilySSF541719.15E-16254IPR016177DNA-binding domain
PfamPF008476.4E-8244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CIKGSSATFN FPLSSSQHHV  60
PPNASMSPKS IQRAAAAAAA ATNGGGADSN VAATTAAATF AAPAPSFVSS PSMCSSPSDQ  120
LDDEVSLVQC VGAYTPSEPM DMMDYWCNYD AFQSPKYVDQ VMYNNIAAAS FGPPTVEELL  180
EEAEEIQLWS FC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F04365.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063990.11e-140PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLA0A059BYH41e-138A0A059BYH4_EUCGR; Uncharacterized protein
STRINGXP_010063990.11e-139(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29992767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.11e-26ERF family protein