PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F04420.1.p
Common NameEUGRSUZ_F04420
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRF
Protein Properties Length: 214aa    MW: 23877.5 Da    PI: 9.1159
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F04420.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC78.18.4e-2584128145
               WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                       d+epgrCrRtDGKkWRCs+++++++k+CE+H+hrg++rsrk++e+
  Eucgr.F04420.1.p  84 DPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKHRSRKHVEQ 128
                       79****************************************997 PP
2QLQ56.21e-191549236
               QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                      +FT aQ+q+L++Q+l+yKy++++++vP+eL++ ++
  Eucgr.F04420.1.p 15 PFTEAQWQELETQALVYKYMVSGLQVPSELIFSVR 49
                      9******************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.6E-111450IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.9E-131548IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.5761550IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.8884128IPR014977WRC domain
PfamPF088797.5E-2085127IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MSGSGSGRMM NRYYPFTEAQ WQELETQALV YKYMVSGLQV PSELIFSVRR SLESNSSSLS  60
FGPFPPHQVG GWGEFQAGYG RKADPEPGRC RRTDGKKWRC SKEAYPDSKY CEKHMHRGKH  120
RSRKHVEQQQ QPPALSIGAA ACPPTSSCII SASGEHEYHH PTLHPFMTTT SSSSSARPAP  180
DAGPFPHPYE ASSHHLQHNY VLNSYSQNHK DGR*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a role in the regulation of cell expansion in leaf and cotyledons tissues. Acts together with GIF1 for the development of appropriate leaf size and shape through the promotion and/or maintenance of cell proliferation activity in leaf primordia. {ECO:0000269|PubMed:15326298, ECO:0000269|PubMed:15960617}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F04420.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064038.11e-158PREDICTED: growth-regulating factor 5
SwissprotQ8L8A65e-53GRF5_ARATH; Growth-regulating factor 5
TrEMBLA0A059BZF21e-158A0A059BZF2_EUCGR; Uncharacterized protein
STRINGXP_010064038.11e-158(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM45672651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-49growth-regulating factor 5