PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G00254.1.p
Common NameEUGRSUZ_G00254
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 141aa    MW: 15796.8 Da    PI: 9.5827
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G00254.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.95.4e-10120140222
                       --SS-EEEEEEE--TT-SS-E CS
              WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                       dDg++WrKYGqKe+ g+++pr
  Eucgr.G00254.1.p 120 DDGFSWRKYGQKEILGAKYPR 140
                       8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-8106140IPR003657WRKY domain
SuperFamilySSF1182901.44E-7114140IPR003657WRKY domain
PfamPF031069.5E-7120140IPR003657WRKY domain
PROSITE profilePS5081110.131120140IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MEDWEKMNLP NELIQGRELT KQLQRQLHLA VSSSSSSSHE QTQEMLIRGI LTSYDEALSM  60
LNAEPPVGGC PRRLSVSPPS LGGNPMSRGD SDRNLDDGST PRKRKAMQKW TERVRAPTPD  120
DGFSWRKYGQ KEILGAKYPR *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G00254.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018732490.14e-98PREDICTED: probable WRKY transcription factor 8
TrEMBLA0A059B9891e-98A0A059B989_EUCGR; Uncharacterized protein
STRINGXP_010068012.12e-91(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19332783
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.18e-23WRKY family protein