PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01063.1.p
Common NameEUGRSUZ_G01063
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 209aa    MW: 23322.1 Da    PI: 4.7367
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01063.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.62.6e-1525378128
               NAM  78 tksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       t+ g+Wk t k++ + s  +g+++g++k+Lv+y+gr+pkg+ktd vmhey+l
  Eucgr.G01063.1.p   2 TELGFWKDTCKKRVIRSLvTGKQIGIRKILVYYEGRQPKGRKTDVVMHEYHL 53 
                       678********99998878999*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.829176IPR003441NAC domain
SuperFamilySSF1019415.89E-17374IPR003441NAC domain
PfamPF023659.3E-6353IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MTELGFWKDT CKKRVIRSLV TGKQIGIRKI LVYYEGRQPK GRKTDVVMHE YHLNSSVSDS  60
KISGQMAFVL CHIIDRKRKK ARSAKACASA SSSTISTPND SGNGRSDEVS TEVSEEVTIE  120
TQNQNEILIS SMPDDNGPII PQQDHMHEEQ SPLYDGCPFI DGHSDELYDL LYSPSNGMEI  180
LDLWNIPTDE LVCQSFLPGE EYDGLTFT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17579RKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01063.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065767.11e-153PREDICTED: protein NTM1-like 9
RefseqXP_018733117.11e-153PREDICTED: protein NTM1-like 9
TrEMBLA0A059BBQ21e-154A0A059BBQ2_EUCGR; Uncharacterized protein
STRINGXP_010065767.11e-152(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.15e-15NAC domain containing protein 1