PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01074.1.p
Common NameEUGRSUZ_G01074, LOC104452970
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 277aa    MW: 31350.8 Da    PI: 5.879
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01074.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.77.1e-3091342128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka......eekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                       p+G+rF+Pt+++lv +yL+kk++gk++ +   i+e+diy++eP++L +++++      + +e++fF++r +      +++r+t+ g+Wk+t  
  Eucgr.G01074.1.p   9 PVGVRFKPTEDQLVGHYLTKKLKGKETVC--EIPELDIYNLEPSELFARYNElsslplDGNECFFFCPRGH------KRKRKTQCGFWKETCA 93 
                       89************************777..59*************753333344565889*******966......5678899********* PP

               NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ + +  ++e++gl+++Lv++kgr++++++t+  m ey+l
  Eucgr.G01074.1.p  94 KRVIQAPdTSEQIGLRRSLVYHKGRQRDAHRTNSHMYEYHL 134
                       999999878899****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-336157IPR003441NAC domain
PROSITE profilePS5100532.748157IPR003441NAC domain
PfamPF023656.9E-199134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MAESARAWPV GVRFKPTEDQ LVGHYLTKKL KGKETVCEIP ELDIYNLEPS ELFARYNELS  60
SLPLDGNECF FFCPRGHKRK RKTQCGFWKE TCAKRVIQAP DTSEQIGLRR SLVYHKGRQR  120
DAHRTNSHMY EYHLKSNVSD SEISDPAAWV LCQIINKKSK KAKSGTASTS TDLSRPSNLN  180
DSQKEETQDI SAQASPGVTV EFPFPNEMSN SNLPIPDQQP QMSEEQYLSH DDCQHDDKPS  240
DGFWCKSYSP SDGIDLADLF KESTDQYSKL EDNTSV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-1721639174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01074.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065772.10.0PREDICTED: protein NTM1-like 9
TrEMBLA0A059BCR30.0A0A059BCR3_EUCGR; Uncharacterized protein
STRINGXP_010065772.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.16e-27NAC transcription factor-like 9