PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01077.1.p
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 222aa    MW: 24936.4 Da    PI: 5.5837
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01077.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.83.2e-13197963128
               NAM  63 krdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +      +g++++r+++ g+Wk+t  ++ + +  +ge++gl+++Lv++kgr++++++t+  m ey+l
  Eucgr.G01077.1.p  19 P------RGHKRKRKIEGGFWKETCAKRVIQAPdTGEQIGLRRSLVYHKGRQRDAHRTNSHMYEYHL 79 
                       3......567788999**********999999888999****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.2711102IPR003441NAC domain
SuperFamilySSF1019418.11E-199102IPR003441NAC domain
PfamPF023651.7E-61579IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MAELSNLPLD GNEGFFLCPR GHKRKRKIEG GFWKETCAKR VIQAPDTGEQ IGLRRSLVYH  60
KGRQRDAHRT NSHMYEYHLK SNVSDSEISD PAAWVLCHII NKKSKKAKSA TASTSTDLRR  120
PSNLNDSQNE ETQDISAQAS PGVTVEFPFP NEMSNSNLPI PDQQPQMSEE QYLSHDDCQH  180
DDKPSDGFWC KSYSPSDGID LADLFNESTD QYSKLEDNTS V*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01077.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065772.11e-154PREDICTED: protein NTM1-like 9
TrEMBLA0A059BCR31e-153A0A059BCR3_EUCGR; Uncharacterized protein
STRINGXP_010065772.11e-153(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.22e-13NAC transcription factor-like 9