PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01503.4.p
Common NameEUGRSUZ_G01503
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 335aa    MW: 37092.1 Da    PI: 6.7781
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01503.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.34e-29262312151
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                       k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQ
  Eucgr.G01503.4.p 262 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 312
                       79************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.407259319IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.1E-24260312IPR009057Homeodomain-like
SuperFamilySSF466892.33E-13260312IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-24262313IPR006447Myb domain, plants
PfamPF002492.1E-6264312IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MGSIPPELSL DFRPSFVPAT IGDLLREVSA IGDARARSSR LDGYVARLQE EMHKIDAFKR  60
ELPLCMLLLK DAISALKMES EQCAAPTSAQ PVLEEFIPLK KDKDEDDEKL ELKKETDDSR  120
DKKNWMSSVQ LWNTDSSPSA VHSPDLKQEL KLETTANQAQ TLSATEDILE TCKGRNGGRP  180
FVQLKGYSPF SVTPVASAQE EKMKLPVQGL SLLSSGIKNP REKSFCTDAR TGCGRLIPSP  240
AHTVQSNLPS RGHQPPQQNA RKQRRCWSPE LHRRFVNALQ QLGGSQVATP KQIRELMQVD  300
GLTNDEVKSH LQVSSSQDPI SFCVLDDVSN IYLT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01503.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066057.10.0PREDICTED: myb family transcription factor EFM
TrEMBLA0A059BD660.0A0A059BD66_EUCGR; Uncharacterized protein
STRINGXP_010066057.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.13e-47G2-like family protein