PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01710.1.p
Common NameEUGRSUZ_G01710, LOC104453364
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family DBB
Protein Properties Length: 294aa    MW: 32649.2 Da    PI: 6.6442
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01710.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.55.5e-08443538
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                       C+ +++ e+++fC  ++  lC+dC    H+       Ht
  Eucgr.G01710.1.p  4 QCDVCDKGEATIFCAADEAALCDDCDRRVHHAnklankHT 43
                      7******88*******************964447777777 PP
2zf-B_box29.41.7e-095492238
          zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                      e + C+ ++e ++ lfC++++  lC++C + +H++  Ht
  Eucgr.G01710.1.p 54 ESPLCDICQERRALLFCQEDRAILCRECDVPIHRSneHT 92
                      6789*****************************888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.537147IPR000315B-box-type zinc finger
CDDcd000211.44E-4333No hitNo description
SMARTSM003366.5E-8447IPR000315B-box-type zinc finger
PfamPF006439.4E-6444IPR000315B-box-type zinc finger
PROSITE profilePS5011910.36753100IPR000315B-box-type zinc finger
SMARTSM003361.1E-1353100IPR000315B-box-type zinc finger
PfamPF006434.9E-85492IPR000315B-box-type zinc finger
CDDcd000211.38E-956100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MKIQCDVCDK GEATIFCAAD EAALCDDCDR RVHHANKLAN KHTRYSLLHP PFKESPLCDI  60
CQERRALLFC QEDRAILCRE CDVPIHRSNE HTQKHNRFLL TGVKLSSSSP PNQASSSSSA  120
LSTDMKISRS SAKRQNCPPS SVSTAERSLP LGAYQDENHT SDAGSISTSS ISEYLMETLP  180
GWHVDEFLDP SSTASNGYCK TFDHMLPVVD PDLVTDTSSS ASKDFANYSP QVPHQFPHLS  240
LHLSQAQGAF FHGMDQQEKA RSNRFIKKQS DDGFLYGSSH QHPFSHNSQA FWQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01710.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066200.10.0PREDICTED: B-box zinc finger protein 20 isoform X1
TrEMBLA0A059BDU50.0A0A059BDU5_EUCGR; Uncharacterized protein
STRINGXP_010066200.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM65972743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.12e-51salt tolerance homolog2