PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01757.1.p
Common NameEUGRSUZ_G01757, LOC104453406
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 318aa    MW: 35027.7 Da    PI: 6.8537
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01757.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-084588754
                      HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +v+ +k+L
  Eucgr.G01757.1.p 45 GREKLRRDRLNEHFIELGNTLDPD----RPKNDKATILSDTVQLLKDL 88
                      59*******************997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.1383888IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-1140110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-1242103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-64494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-64488IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.37E-64692No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MHHPPNPDSL SLLQSARTPN APPEHPVPST SRRDEVAVLK SQKAGREKLR RDRLNEHFIE  60
LGNTLDPDRP KNDKATILSD TVQLLKDLTA QVNQLKAEYS TFCEESRELT QEKNDLKEEK  120
ASLKSDIESL NAQYQQRARA MFPWPIMDHS VVMAPPSYPY PVPVAVPSGP IPVHPPMQPY  180
PFYATPNSNV FPNSHSTLLP FATPNMQFEQ LSGHYAHPLM QMGNQSLVSS NKNDKGKERK  240
HEKSGSSNDV TTDLELKTPG SATENDSSSP HRSSVKSMRK DDDTAERSSS THSSSPHSVQ  300
DSSSSSIAGG SNSRAND*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01757.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066253.10.0PREDICTED: transcription factor bHLH121
RefseqXP_010066254.10.0PREDICTED: transcription factor bHLH121
SwissprotQ9LT232e-76BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A059BEI90.0A0A059BEI9_EUCGR; Uncharacterized protein
STRINGXP_010066253.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23532762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-73bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]