PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G02094.1.p
Common NameEUGRSUZ_G02094, LOC104453652
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ARR-B
Protein Properties Length: 678aa    MW: 72986.2 Da    PI: 6.3804
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G02094.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.53e-28224277155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  Eucgr.G02094.1.p 224 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 277
                       79*******************.********************************8 PP
2Response_reg783.4e-26411491109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+ + +++l+q+l++  y +v+++ +++ al+ll+ek+  +D++l D+ mp+mdG++ll++   e  +lp+i++++ g+ + + + ++
  Eucgr.G02094.1.p  41 VLVVDDDLICLKVLEQMLRRCAY-NVTTCPQATVALNLLREKKgcFDIVLSDVHMPDMDGYKLLEHVGLEM-DLPVIMMSGDGSTNAVMRGIR 131
                       89*********************.*******************************************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ peel +
  Eucgr.G02094.1.p 132 HGACDYLIKPIRPEELQN 149
                       ***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.3E-4138173No hitNo description
SuperFamilySSF521726.83E-3638162IPR011006CheY-like superfamily
SMARTSM004483.5E-3139151IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.2540155IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.8E-2341149IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.59E-2742154No hitNo description
Gene3DG3DSA:1.10.10.605.0E-30221282IPR009057Homeodomain-like
PROSITE profilePS5129411.209221280IPR017930Myb domain
SuperFamilySSF466891.25E-19221281IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-24224277IPR006447Myb domain, plants
PfamPF002499.8E-7226275IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    Send to blast
MDALQRAVQP PGAGGYGPHA SGRGGGGDLA VPDQFPVGLR VLVVDDDLIC LKVLEQMLRR  60
CAYNVTTCPQ ATVALNLLRE KKGCFDIVLS DVHMPDMDGY KLLEHVGLEM DLPVIMMSGD  120
GSTNAVMRGI RHGACDYLIK PIRPEELQNI WQHVVRKKWN GNKEIEHSGS LEDNDRHKRG  180
SDDADGSAVN EGGEGLLKNQ KKRSIAKEED EPELDSDDPT TSKKPRVVWS VELHQQFVSA  240
VNQLGIDKAV PKRILELMNV PGLTRENVAS HLQKFRLYLK RLSGVAQQQG GISSSFCGTV  300
ESNIKLGPLG RYDIQALAAS GQISPQALAA LQSELLGRPT SNLVLPSFDQ PTLLQASLQG  360
SKCLPVEHGV AFGQPLIKCP SNVSKQYQQS ILSSQDAPSG FGPWQATSLS TVGNNNIVAG  420
SNIQSNNTLM DIFQRQQQYQ QKQQLQQQQQ QQQQQQLPQQ PLLEPSRLIN VQPSCLVVPH  480
SSAGFQAAGS PTSVNQSSTY NRSAVIDYSL PSYQGNTALN TGLASDKDLK TSGVLGGYSV  540
QGSISPTLSS SSANADSSNC CPLRNPSAKY NIIGQAPGVV SDFSNIQGSY DAKSGEAIDQ  600
GLLKNLGFVS KGSGTPSLFT VDEFGPPLKQ IYSGKVHLES SAGRVKQEPS FDFVDAKVSI  660
PVLEQLSSND LMSVFTE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-23220283164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G02094.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066564.10.0PREDICTED: two-component response regulator ORR21 isoform X1
RefseqXP_018733087.10.0PREDICTED: two-component response regulator ORR21 isoform X1
SwissprotQ8H7S71e-156ORR21_ORYSJ; Two-component response regulator ORR21
TrEMBLA0A059BEG20.0A0A059BEG2_EUCGR; Uncharacterized protein
STRINGXP_010066564.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM81502736
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-107response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]