PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G03094.1.p
Common NameEUGRSUZ_G03094, LOC104454425
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 254aa    MW: 27418.2 Da    PI: 5.2372
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G03094.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-1971119355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAaka+++a+ +++g
  Eucgr.G03094.1.p  71 YRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAAKAYDEAATAMYG 119
                       9****999.**********8...3.35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-3670133IPR001471AP2/ERF domain
CDDcd000183.25E-3070129No hitNo description
PROSITE profilePS5103222.27370127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-3270128IPR001471AP2/ERF domain
SuperFamilySSF541712.62E-2171128IPR016177DNA-binding domain
PfamPF008477.4E-1471119IPR001471AP2/ERF domain
PRINTSPR003674.9E-107182IPR001471AP2/ERF domain
PRINTSPR003674.9E-1093109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MSPEIVERKR SRSRKEGSMS VAETLAKWKQ YNDQLDPQAN GDKPARRVPA KGSKKGCMKG  60
KGGPENTTFN YRGVRQRTWG KWVAEIREPN RGSRLWLGTF PTAIEAAKAY DEAATAMYGP  120
CARLNFPTAS HPMSFGDLDA RATTPVGTTA NTTGTPSTGY SAGTPSTGYS AGTPSEATTL  180
SSQSELTGGP EVKDGDRKGE SNADGGEMEP KSESIVDFDW LSDYAVDDLF DVDELLRTLE  240
SDPKFSSDVK MEH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-16711271572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1813KRSRSR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G03094.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067565.10.0PREDICTED: dehydration-responsive element-binding protein 2B
TrEMBLA0A059BJ530.0A0A059BJ53_EUCGR; Uncharacterized protein
STRINGXP_010067565.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM85322538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.19e-32DRE-binding protein 2A