PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G03094.2.p
Common NameEUGRSUZ_G03094, LOC104454425
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 236aa    MW: 25303.8 Da    PI: 4.7683
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G03094.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.8e-1953101355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAaka+++a+ +++g
  Eucgr.G03094.2.p  53 YRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAIEAAKAYDEAATAMYG 101
                       9****999.**********8...3.35**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.2E-3652115IPR001471AP2/ERF domain
PROSITE profilePS5103222.27352109IPR001471AP2/ERF domain
CDDcd000181.60E-3052111No hitNo description
Gene3DG3DSA:3.30.730.107.7E-3252110IPR001471AP2/ERF domain
PfamPF008476.6E-1453101IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-2153110IPR016177DNA-binding domain
PRINTSPR003674.4E-105364IPR001471AP2/ERF domain
PRINTSPR003674.4E-107591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MSVAETLAKW KQYNDQLDPQ ANGDKPARRV PAKGSKKGCM KGKGGPENTT FNYRGVRQRT  60
WGKWVAEIRE PNRGSRLWLG TFPTAIEAAK AYDEAATAMY GPCARLNFPT ASHPMSFGDL  120
DARATTPVGT TANTTGTPST GYSAGTPSTG YSAGTPSEAT TLSSQSELTG GPEVKDGDRK  180
GESNADGGEM EPKSESIVDF DWLSDYAVDD LFDVDELLRT LESDPKFSSD VKMEH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-17531091572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G03094.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067565.11e-174PREDICTED: dehydration-responsive element-binding protein 2B
TrEMBLA0A059BJ531e-173A0A059BJ53_EUCGR; Uncharacterized protein
STRINGXP_010067565.11e-173(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.17e-32DRE-binding protein 2A