PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H00344.1.p
Common NameEUGRSUZ_H00344, LOC104416153
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 444aa    MW: 48135.8 Da    PI: 5.2468
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H00344.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10248306563
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       +r++r  +NR +A rs +RK+ +i+eLe+kv++L+++ + L ++l  l+     l +e+
  Eucgr.H00344.1.p 248 RRAKRILSNRQSAARSKERKLRYIAELERKVQTLQTQATNLSSQLTVLQRDTTGLNTEN 306
                       699*****************************************999988777666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-16244308IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737246309IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.3E-10248303No hitNo description
PfamPF001702.0E-9248306IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11248300No hitNo description
CDDcd147033.96E-25249298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MDNEMPHSHE GGTPSPDWST GFSQTNESFG DNSEQHASST VPLSVPAPTF VPEPGALGQG  60
AGETDSSQFG PDVGQMLDDP FMNLGHRRAH SEILIRPENG INVNGDHGVL GGGYEPIFPD  120
ENEEPDLYGI YLDMDRLNSS SAMTPLFQVE EPSSAAVAVL SPPLPPPPAV AAPLAASTGP  180
ALVLGSGSAA VSAGERPRVK HHYSQSVDEL MTINPEMLAS SSEAPSGVDR KKALSAAKLA  240
ELALVDPRRA KRILSNRQSA ARSKERKLRY IAELERKVQT LQTQATNLSS QLTVLQRDTT  300
GLNTENHELK YRLQTMEQQV HLQDALNDAL KDEIEHLKVL TGQAMPNGAP VMMPFAPFAH  360
RPLFYPPYNS DPRPLFAAQQ LQQMQIQPPE MQHPFQVQHH PRPFQLQLPQ LQQPTGGFSF  420
GGPLHLAIQG DSHAAENSSD LRN*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H00344.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010025885.10.0PREDICTED: probable transcription factor PosF21
SwissprotQ040886e-97POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A059AVA40.0A0A059AVA4_EUCGR; Uncharacterized protein
STRINGXP_010025885.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM24452772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.17e-87bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]