PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H00819.1.p
Common NameEUGRSUZ_H00819
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 389aa    MW: 41397.2 Da    PI: 6.5144
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H00819.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000532462623955
                       TCHHHHHHHHHHHHHHH CS
               HLH  39 sKaeiLekAveYIksLq 55 
                       +Ka+ L +A+eY+ksLq
  Eucgr.H00819.1.p 246 DKASLLDEAIEYLKSLQ 262
                       8***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-6244289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-5244270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MRSWSCSGKT DGSSFRARDR PWREQPRSRL AAAAGRSARG ERRRRHRLFV QEDEVDSWLQ  60
YPFDVFNGGG FCSHLPRSPA PCVTSSSDAG CDFGTSDSGE VTSENAASAG SALVPKAAIG  120
ELSPSVSNES TAAEPKGTTP QASSGGVRGH VRRERASGAA VDAPPGGGGG VGGEEGVARD  180
ETMVTSPPVG SATTGMGRLA PAGAAPQVGM QREKRKREGR DAGDGEWLSD EHFADTNLPL  240
PIFQADKASL LDEAIEYLKS LQLQVQMMSM GCSMVPVVFP GVQAYMPCMN MGTATNVGMN  300
PPTMLYPNIL ASSLMQLSAN GVHLSPGWPF SNFSMQQETP DQFRTPPPNH LDPTLSSKMI  360
QNLSQRFPAN AGSFQQQQGL YYMQQPPQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H00819.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010069677.10.0PREDICTED: transcription factor PIF1
TrEMBLA0A059AXD30.0A0A059AXD3_EUCGR; Uncharacterized protein
STRINGXP_010069677.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.13e-17phytochrome interacting factor 3-like 5