PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H02386.1.p
Common NameEUGRSUZ_H02386
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 352aa    MW: 38835.3 Da    PI: 6.7161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H02386.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.21.2e-12171217455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        h  +Er+RR++i +++  L  ++P++     kK++Ka+iLe A+e++k+Lq
  Eucgr.H02386.1.p 171 EHVLAERKRREKISKRLIALSAIIPNL-----KKMDKASILEDAIEHLKELQ 217
                       6899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.574167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-17171230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-10171217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-16172229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-13172221No hitNo description
SMARTSM003539.2E-14173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MVEDAAYFHH HHHQQQVNSP FSFDDEFDLF HPSFHSEPCS NSSPSHLVPL VSRETMPGFA  60
APSIEAPREL AGRPRKKLKT ERWNSLGTPA HETMTRKVVI SPSPSPSRSL SPDSHLISFG  120
NPDSSPAISN PIHDICLALM CVKGTYEIQD CEGPKTKNTS AATRTPVHAQ EHVLAERKRR  180
EKISKRLIAL SAIIPNLKKM DKASILEDAI EHLKELQQRV KALEEEAAAA KTVESVVVVK  240
KSQLTTDEDT YSSSDEHSCS QIDRPLSLPE IEARVSGNCV LIKIHCERRN GSVSKMIGEI  300
EELNLTVVNS CIMPFGSSIL DVTILAQMDV GSSLKMGDLV RNLRQALLDL M*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17379PRKKLKT
2175180ERKRRE
3176181RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H02386.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010023397.10.0PREDICTED: transcription factor bHLH19
RefseqXP_018715657.10.0PREDICTED: transcription factor bHLH19
TrEMBLA0A059B1570.0A0A059B157_EUCGR; Uncharacterized protein
STRINGXP_010023397.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM49227146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.18e-47bHLH family protein