PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H02628.1.p
Common NameEUGRSUZ_H02628, LOC104414242
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 532aa    MW: 57024.9 Da    PI: 5.4872
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H02628.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.72.7e-10341388455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i  ++  L++l+P++    +k   Ka++L + ++Y++sLq
  Eucgr.H02628.1.p 341 SHSLAERVRREKISLRMKALQDLVPNC----NKVTGKAMMLDEIINYVQSLQ 388
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.45E-11335392No hitNo description
SuperFamilySSF474593.93E-17335406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-18337405IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.815337387IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-7341388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.3E-11343393IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MEGSSTPLTQ NSSTFGIGIH PNDQLPNCFL VAGWEDSLDQ GDPFESALSS IVSSPVAPHA  60
GEGEAGMIRE LIGRLGSICD SGQASPGSYN HSTTNTPCYS TPLNSPPELS LSMADQLAHG  120
GFPAPGSHFP GHPSFVSVMA DPGFAERAAR LSCFGPRNVN AANLNGGLGL NASEFLGKQA  180
NKLDSGRFCR VPSSQSLRAN VGSQICAQGN ERSFLQPGVS ISTPENGEMG ESREGSSISE  240
QVTHGEMRAN GQIDVNSRKR KPILKAKGRN SAVSPQSAKD SEVPMENEEP ITKKIKPAET  300
DGNEKDAAKG DQKQSKENSK MAEPQKDYIH VRARRGQATD SHSLAERVRR EKISLRMKAL  360
QDLVPNCNKV TGKAMMLDEI INYVQSLQRQ VELLSMKLST LNPTVDFNLE AFLSKDILHP  420
QGPLPNSLYP VDSSGSMLYG YQPPQGLMPM PSVVSSNMDA QFPVNFLNSG IHRDASLNLP  480
LCVDNYGEAS APAPALWEDD LQSVVQMGLG QIEPQRVEQG SLATSQMKVE L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H02628.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010023592.10.0PREDICTED: transcription factor bHLH62
TrEMBLA0A059B2030.0A0A059B203_EUCGR; Uncharacterized protein
STRINGXP_010023592.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23322775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48560.13e-67bHLH family protein