PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I00608.2.p
Common NameEUGRSUZ_I00608
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 330aa    MW: 36961.7 Da    PI: 4.5748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I00608.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-12181224654
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                        ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Eucgr.I00608.2.p 181 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 224
                       589*********************66......****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491175224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-15178236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-9181224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.1E-12181230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.06E-5182224No hitNo description
Gene3DG3DSA:4.10.280.103.4E-15182236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MELSEQGLLE ELLAPRREMA TCWTTFQHND LPLPPCWSLD SSGDNPAFAS SNPLQILSLS  60
HQPAGFDDAR FAGAYHPLDV VHTYTVPSEL EYTANYNNSN DAYSSMVEDE EMFDLIGNDI  120
YVQCAEERMM AMNSCKVEAS EQAADINNGG FAGNTDAGSS YCFEKRSSRP KKLEGQPSKN  180
LMAERRRRKR LNDRLSMLRS IVPKISKMDR TSILGDTIDY MKELLDKINR LQDEEEIEVG  240
TGSPRKLMGI SKDLKPNEVL VRNSPKFDVE RKDTDTRIDI CCATKPGLLL STVNTLEYLG  300
LELQQCVISC FNDFSMQASC SEVHVINNI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183190ERRRRKRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I00608.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027998.10.0PREDICTED: transcription factor bHLH93
TrEMBLA0A059ALU30.0A0A059ALU3_EUCGR; Uncharacterized protein
STRINGXP_010027998.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-75beta HLH protein 93