PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I01094.1.p
Common NameEUGRSUZ_I01094
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 228aa    MW: 24792.9 Da    PI: 5.3181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I01094.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.7e-051091481054
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       + RR+++ +++ +L++l+ +      +K + a++L +A+ YIk L
  Eucgr.I01094.1.p 109 QGRREKLGERILTLQQLVSPF-----GKTDTASVLHEAMGYIKFL 148
                       68******************8.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.78899148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-4104154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.31E-6107153No hitNo description
SuperFamilySSF474592.75E-12109168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-8109155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MADEVDFAEE DNVDESGSFC QLLLANGVEG VEPAMEKQSF IFPKDKKSPQ MLCFGRDVAE  60
ERGRSLLFHQ SQQATVACTP ASASLPPPSC TKSTSCNAPR KPSLCFEQQG RREKLGERIL  120
TLQQLVSPFG KTDTASVLHE AMGYIKFLHE QVQVLCSPYL HQPSTPTHLL PEFGENGGQE  180
GSSKDLRSRG LCLVPMACTY HLQSSNNGAD LWSPSMATSF SSSSTKE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I01094.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028400.11e-152PREDICTED: transcription factor bHLH113
TrEMBLA0A059AMR61e-167A0A059AMR6_EUCGR; Uncharacterized protein
STRINGXP_010028400.11e-151(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM74022234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.14e-36bHLH family protein