PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I01178.1.p
Common NameEUGRSUZ_I01178, LOC104418763
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 371aa    MW: 40274.8 Da    PI: 5.665
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I01178.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.41.2e-31244299156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k r+ W+peLH+rF++a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Eucgr.I01178.1.p 244 KRRRSWSPELHQRFLDALQQLGGPQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 299
                       6799**************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.784241301IPR017930Myb domain
SuperFamilySSF466895.29E-17241302IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.0E-28242302IPR009057Homeodomain-like
TIGRFAMsTIGR015576.9E-27244299IPR006447Myb domain, plants
PfamPF002497.7E-9246297IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MCSASDSSPP PPFVPRTIRH FLTEIADVGD GSSRLDDFVE RLEGELDKID AFKRELPLCM  60
LLLSEAIEAL KNGSMRPSAP SARPVLEQFI PLENDAGGSE GVGEKPKDER RCTTSSPKLV  120
DTAENSSSSS SFDLNENPKA ELQTEIVEEQ KLAACEGQSQ FRTCESRNAD ARQSHPLFPS  180
AMASGELAEI PLHGFLSLGV GIKNPSEESS SSTGTVSGRS RTISSVDCNA PSSSRGGNQQ  240
TAKKRRRSWS PELHQRFLDA LQQLGGPQVA TPKQIRELMQ VDGLTNDEVK SHLQKYRLHN  300
QRHPIKAFRS QKSGIQTVLQ MATDISGDSL KMTGPQSPSP QSSFHIVGNP GLTSHTASDS  360
MEEDREPRDP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A9e-14244297154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-14244297154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-14244297154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-14244297154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-14244302260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I01178.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028507.10.0PREDICTED: myb family transcription factor EFM isoform X2
TrEMBLA0A059APA10.0A0A059APA1_EUCGR; Uncharacterized protein
STRINGXP_010028507.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM145351021
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.11e-43G2-like family protein