PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I01178.2.p
Common NameEUGRSUZ_I01178
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 319aa    MW: 34535.4 Da    PI: 6.7214
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I01178.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.79.5e-32192247156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k r+ W+peLH+rF++a++qLGG+++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Eucgr.I01178.2.p 192 KRRRSWSPELHQRFLDALQQLGGPQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 247
                       6799**************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.784189249IPR017930Myb domain
SuperFamilySSF466894.12E-17189250IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-28190250IPR009057Homeodomain-like
TIGRFAMsTIGR015575.5E-27192247IPR006447Myb domain, plants
PfamPF002496.1E-9194245IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MGFLVFGFFL YLAAIEALKN GSMRPSAPSA RPVLEQFIPL ENDAGGSEGV GEKPKDERRC  60
TTSSPKLVDT AENSSSSSSF DLNENPKAEL QTEIVEEQKL AACEGQSQFR TCESRNADAR  120
QSHPLFPSAM ASGELAEIPL HGFLSLGVGI KNPSEESSSS TGTVSGRSRT ISSVDCNAPS  180
SSRGGNQQTA KKRRRSWSPE LHQRFLDALQ QLGGPQVATP KQIRELMQVD GLTNDEVKSH  240
LQKYRLHNQR HPIKAFRSQK SGIQTVLQMA TDISGDSLKM TGPQSPSPQS SFHIVGNPGL  300
TSHTASDSME EDREPRDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-13192245154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-13192245154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-13192245154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-13192245154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-13192250260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I01178.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028507.10.0PREDICTED: myb family transcription factor EFM isoform X2
TrEMBLA0A059ANG40.0A0A059ANG4_EUCGR; Uncharacterized protein
STRINGXP_010028507.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.11e-30G2-like family protein