PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I01335.1.p
Common NameEUGRSUZ_I01335, LOC104418889
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 578aa    MW: 62902.5 Da    PI: 6.8085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I01335.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.8e-10428485562
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                       kr +r   NR +A rs +RK  +i+eLe kv++L++e ++L  +l  l+  +  l+++
  Eucgr.I01335.1.p 428 KRVKRILANRQSAARSKERKMRYIQELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 485
                       899******************************************9998877666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-18424488IPR004827Basic-leucine zipper domain
PfamPF077164.2E-9425477IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852426489IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-11428484No hitNo description
SuperFamilySSF579591.76E-11428484No hitNo description
CDDcd147031.50E-23429478No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MGDAEDSRND TSRGLQSSFG TLQPKQAFSM NHLDIPHLSA PDMRAPMRQF AQSFVGGGDG  60
NKRAGIPPSH PNQIPPISPY SQIPMPRPLN QQMGSPNFSH GPTHSRSLSQ PSIFNFDNLP  120
PLSPSPFRDS PSSTSISDHV SGDVSMEDRD ASSHPLLPPS PFPRGNPSRI GESLPPRKAH  180
RRSNSDIPFL SSLMQSSPPL IPSSSSKGLG TLERSVSGRE SMSSAKPAQL VKKESSWDRG  240
VYSNAEGMGE RKSEGEVVDD LFSAYMNLDG IDALNSSETD EKNGTETRED LDSRASGTKT  300
NGGDSSDNEA ESSVNECGNS MQRLGMNSSS EKREGIKRSA GGDIAPASRH YRSVSMDSFM  360
GKLNFADEST KMPPSPGVRP GQLSPGNSID GNSNTFSLEF GNGEFSGAEL KKIMANDKLA  420
EIALTDPKRV KRILANRQSA ARSKERKMRY IQELEHKVQT LQTEATTLSA QLTLLQRDSV  480
GLTNQNNELK FRLQAMEQQA QLRDALNEAL TAEVQRLKLA TAELNSESHP SKCMVSQLPV  540
SSQMFQLHQM QQQQQSQQQT QSQQQNGNTT TKSESNQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I01335.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028661.10.0PREDICTED: uncharacterized protein LOC104418889
TrEMBLA0A059ANP70.0A0A059ANP7_EUCGR; Uncharacterized protein
STRINGXP_010028661.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM42242757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-154bZIP family protein