PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02007.1.p
Common NameEUGRSUZ_I02007
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 370aa    MW: 40849.5 Da    PI: 4.5729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-182069255
               AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      ++ GVr+++ +grWvAeI+d      ++ r++lg+f++aeeAa+a+++a+  l+g
  Eucgr.I02007.1.p 20 RFIGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDSAEEAARAYDEAACLLRG 69
                      689******.7*********33....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.11E-301976No hitNo description
SuperFamilySSF541716.34E-192077IPR016177DNA-binding domain
PfamPF008473.2E-132069IPR001471AP2/ERF domain
SMARTSM003802.0E-332083IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-262076IPR001471AP2/ERF domain
PROSITE profilePS5103219.2032077IPR001471AP2/ERF domain
PRINTSPR003671.9E-72132IPR001471AP2/ERF domain
PRINTSPR003671.9E-74359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MVKEAAAVAA LGGAQRARKR FIGVRQRPSG RWVAEIKDTI QKIRVWLGTF DSAEEAARAY  60
DEAACLLRGA NTRTNFWPCS PSASPSPALP SKVTNLLLQR LKARKTSLAL TSDGLSCQEQ  120
KQPKEELMPE VTGFSEIQFS DYLTDPEDYT AEQNFINDAI TSHYVTNSES SFNFKEDSGC  180
RAGKEKHCDY SMSDVTQSYS DDGNLGRDGV EDADLRVLDL QFLDKFRPSC YYSPFEIAEE  240
IVEPMEPEND GEEPPILTAA MKRMTFERKY SASLYAFNGV RECLKLQLGS RTAMARAHSN  300
ELAKLQNACD KKKDEDKPVG DGFLKVMAEE ENPETPTDTI ASSSSSSSSN EGESSLWSSL  360
DLPTICSVN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02007.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029367.20.0PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A059AQZ10.0A0A059AQZ1_EUCGR; Uncharacterized protein
STRINGXP_010029367.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1827989
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-21related to AP2 11