PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02346.1.p
Common NameEUGRSUZ_I02346
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 324aa    MW: 36225.6 Da    PI: 7.5034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02346.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-1051100154
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL+ +++ +k+L
  Eucgr.I02346.1.p  51 RKVQKADREKLRRDRLNEHFLELGSTLDPD----RPKNDKATILTDTIQVLKDL 100
                       5677889********************997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.33250100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1150123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.27E-851104No hitNo description
PfamPF000105.7E-851100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-1351120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-856106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MKRCVIGREF LPPKALRVMP ESMFFVVFWL SVSVARRQRE EADVRDPVAA RKVQKADREK  60
LRRDRLNEHF LELGSTLDPD RPKNDKATIL TDTIQVLKDL TTEVNKLKAE CAALTEESRE  120
LMQEKNELRE EKSSLKSEVE NLNVQYQQRM RVMYPWAAMD PSIMGPAYSY PVPIPVTPGP  180
MPMHSQLQPF PFFGNQNASA IPAPCSTFIP YSMPANPTVE QQSSQYASSS HVSNKKDSKS  240
RSSDHQRGSN AEQDEESNDV ATDLELKMPG TSSQQDSGEK KGKQTQRKEI SITDGSSSSK  300
FSSSQAFPDS SSNSVSDNPK SSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02346.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029678.10.0PREDICTED: transcription factor bHLH121 isoform X1
SwissprotQ9LT236e-84BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A059ARN30.0A0A059ARN3_EUCGR; Uncharacterized protein
STRINGXP_010029678.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23532762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-62bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]