PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02346.2.p
Common NameEUGRSUZ_I02346, LOC104419656
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 322aa    MW: 35908.5 Da    PI: 6.3576
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02346.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-104998154
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                      r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL+ +++ +k+L
  Eucgr.I02346.2.p 49 RKVQKADREKLRRDRLNEHFLELGSTLDPD----RPKNDKATILTDTIQVLKDL 98
                      5677889********************997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-1148121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.3324898IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.40E-849102No hitNo description
PfamPF000105.7E-84998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-1349118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-854104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MDQWRTDLGA STSVHPQQHQ HHPSSRLHAS HDEPRQREEA DVRDPVAARK VQKADREKLR  60
RDRLNEHFLE LGSTLDPDRP KNDKATILTD TIQVLKDLTT EVNKLKAECA ALTEESRELM  120
QEKNELREEK SSLKSEVENL NVQYQQRMRV MYPWAAMDPS IMGPAYSYPV PIPVTPGPMP  180
MHSQLQPFPF FGNQNASAIP APCSTFIPYS MPANPTVEQQ SSQYASSSHV SNKKDSKSRS  240
SDHQRGSNAE QDEESNDVAT DLELKMPGTS SQQDSGEKKG KQTQRKEISI TDGSSSSKFS  300
SSQAFPDSSS NSVSDNPKSS R*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02346.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029679.10.0PREDICTED: transcription factor bHLH121 isoform X2
SwissprotQ9LT235e-84BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A059ASH40.0A0A059ASH4_EUCGR; Uncharacterized protein
STRINGXP_010029678.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-62bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]