PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02749.1.p
Common NameEUGRSUZ_I02749, LOC104419984
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 373aa    MW: 41954.2 Da    PI: 8.654
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02749.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.74.5e-072332791763
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  Eucgr.I02749.1.p 233 AQRSRVRKLQYIAELERNVQALQAEGSEASAELEFLNQQNLILSMEN 279
                       89**********************************99988887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0016222281IPR004827Basic-leucine zipper domain
CDDcd147039.36E-15224272No hitNo description
SuperFamilySSF579599.21E-6233275No hitNo description
Gene3DG3DSA:1.20.5.1709.2E-6233276No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MANSKGTANI RNLMYSGRHP LLPPKSPFPS VSSSYADHMP SPVNGSKAVQ KPRDSYVHHQ  60
RTSSESLVME EQPSWLDDLL NEPETPVRRA GHRRSSSDSF AYVDVANFSN LDYAAHDEYT  120
LKNMVSVPSW GAQEFDHYRD SRHSSFHPEA SPVKQSGRVW ESSLTKVAPP SGVTSALSYS  180
SQEMDRAPSG ASEKQYQVES NSNDSKSSER RDSSHAKPSA SETDTKRAKQ QFAQRSRVRK  240
LQYIAELERN VQALQAEGSE ASAELEFLNQ QNLILSMENK ALKQRLESLA QEQMIKYLEH  300
EVLEREIGRL RALYQQQQQP PQQQQQQQQH KQPSSSLRRT TSKDLDTQFA NLSLKHKDAN  360
SGQDTVSGPL RT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02749.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010030134.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_010030136.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_010030137.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_010030138.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_018718176.10.0PREDICTED: uncharacterized protein At4g06598
SwissprotQ8W3M72e-67Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA0A059AT200.0A0A059AT20_EUCGR; Uncharacterized protein
STRINGXP_010030133.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33602444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-109bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]