PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00106.2.p
Common NameEUGRSUZ_J00106, LOC104420978
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 315aa    MW: 34439.2 Da    PI: 5.6309
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00106.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.38.6e-25131191259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++ ++++prsY+rCt++   gC++ k+v+r+++dp+ ++itY g H+++
  Eucgr.J00106.2.p 131 QDNHAWRKYGQKMILNAKHPRSYFRCTHKydqGCKAAKQVQRTEDDPEKFHITYIGVHTCR 191
                       79**************************99999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-24120191IPR003657WRKY domain
PROSITE profilePS5081119.462125188IPR003657WRKY domain
SuperFamilySSF1182902.22E-23128191IPR003657WRKY domain
SMARTSM007742.3E-34130192IPR003657WRKY domain
PfamPF031061.6E-23131191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MGTDWPGEEG SPSASAVVKT KRVVEELLRG RCAAIQLQLL LQNPPSRDGS DGSRSLSAEE  60
LAEKILRSFA EGLSVLGSCC ESASAGHDHQ VSPSSGESGD SKRRLNLKDR SGCHKRSKAS  120
QTWIKVSSTT QDNHAWRKYG QKMILNAKHP RSYFRCTHKY DQGCKAAKQV QRTEDDPEKF  180
HITYIGVHTC RDIMKTPRML ITDPDTCVGE SFPIKQELRE EARSDLTNDI VSSADLFLIT  240
ALGSSDQPND PASVSSERMG FDNANGEPAV PTVYPFGDDA DSHALGMDFL RRSVSFDGDF  300
SFDESEFLAS EVGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-25126191469OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00106.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031073.10.0PREDICTED: probable WRKY transcription factor 70 isoform X2
TrEMBLA0A059A9310.0A0A059A931_EUCGR; Uncharacterized protein
STRINGXP_010031072.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-40WRKY DNA-binding protein 70