PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00182.1.p
Common NameEUGRSUZ_J00182, LOC104421051
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 405aa    MW: 45164.5 Da    PI: 8.582
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00182.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-3181134255
           G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       prlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Eucgr.J00182.1.p  81 PRLRWTPDLHLCFLHAVERLGGHERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 134
                       8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.8E-3077135IPR009057Homeodomain-like
PROSITE profilePS5129411.40477137IPR017930Myb domain
SuperFamilySSF466897.35E-1579136IPR009057Homeodomain-like
TIGRFAMsTIGR015574.8E-2381136IPR006447Myb domain, plants
PfamPF002493.6E-982133IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MKKMRNGEST QLTISSPCNK NRKEQDEDSY EEEEEEEEEV GMFKDGRRSS SNSTVDESGK  60
NDGSKVKAGG SVRKYVRSKM PRLRWTPDLH LCFLHAVERL GGHERATPKL VLQLMNVKGL  120
SIAHVKSHLQ MYRSKKTDDP NQAIKDHGFF GDGGDHHVYN LSQLPLLQTF NHRPSSLRFM  180
DASWRGMHNP NQLPGSPVFE RFKIRHIVAS AAGDINCGIN KRFGPPNRDP IHVGHPSFDG  240
EAATTTTAAT CDHYREDHSK SSTLHKSWQK ISQAQVATPS STAKEPDLLR TIEDIRRREQ  300
ATRACLFDDA CGLSSVQEER SRSVLKRKGL DQNAVVDLDL SLRVARPKKE YMENGNNAVD  360
SDLSLSLSPS SRSLFSKLSR LKEDNGDGGG DLKKQDASTL DLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-1782136357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1782136357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1782136357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1782136357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00182.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031180.10.0PREDICTED: myb family transcription factor EFM
TrEMBLA0A059A9S00.0A0A059A9S0_EUCGR; Uncharacterized protein
STRINGXP_010031180.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM93592136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-47G2-like family protein