PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00491.2.p
Common NameEUGRSUZ_J00491
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 416aa    MW: 45463.2 Da    PI: 7.4478
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00491.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.2e-11182223445
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Eucgr.J00491.2.p 182 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 223
                       6889*************************9777777666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-7179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.186181225IPR004827Basic-leucine zipper domain
PfamPF001706.0E-8182224IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-7183226No hitNo description
CDDcd147082.31E-23183234No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-7184227No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141442.1E-30262337IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MASHRIGEIG LSETGPSTHH VPYSVYHGIN NPTTFINQEG SAFDFGELEE AIVLQGVNIR  60
NDEAKAPLYA GRPAATLDMF PSWPIKFQHT PRGSSKSRGE STDSGSGVNT NTLSSSIAEA  120
RREADSPVSV KGSSSLDHQK LQKPMEMAAS DTSPLPSPSQ SASKAPQDKR KGGSTSEKQL  180
DAKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE QDLQRARSQG FLLGACGGAN  240
ISSGATIFDM EYARWLEDNH RHMLELRTGL QAHLPDGDLR VIVDGYLSHY DEIFRLKGVA  300
AKSDVFHLIT GVWATPAERC FLWMGGFRPS ELIKILITQL DPLTEQQFMG ICSLQHSSQQ  360
AEEALSQGLE QLQQSLVDTI AGGPSIEGMQ QMAIALGKLT NLEGFVRQVK SSIVH*
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00491.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031514.10.0PREDICTED: transcription factor TGA2.2 isoform X1
SwissprotQ93XM61e-172TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A059AAS30.0A0A059AAS3_EUCGR; Uncharacterized protein
STRINGXP_010031514.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-154bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]