PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.J00637.1.p

Common Name

EUGRSUZ_J00637, LOC104421417

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 224aa MW: 24715.3 Da PI: 10.0201

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.J00637.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.8	5.4e-14	135	178	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r +rk+kNRe+A rsR+RK+a++ eL kv Le+eN +Lkke Eucgr.J00637.1.p 135 RRLKRKIKNRESAARSRARKQAYQNELVSKVSHLEEENIKLKKE 178 6889**************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.1E-8	130	195	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.772	133	178	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-12	135	178	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.8E-13	135	178	No hit	No description
CDD	cd14707	8.55E-17	135	180	No hit	No description
SuperFamily	SSF57959	7.5E-11	135	178	No hit	No description
PROSITE pattern	PS00036	0	138	153	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence Send to blast
MDRVGSGVPP SSSSSLQRQA SSTLARALSG KTVEEVWKDI QQGQKKRSGS EVRSQGGDQT 60 LSEMTLEDFL VQAGLFADAY LGPSMDLNLS ELATPQSVTP PLGLSPAPST GLLSDTSVPR 120 RKRGDPVVYE RTLERRLKRK IKNRESAARS RARKQAYQNE LVSKVSHLEE ENIKLKKEKI 180 SPSVKCFCMI RAKLCEAEFS SILLIFMIRW SCSGNLIHVS VYE*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.J00637.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018719907.1	1e-163	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Refseq	XP_018719908.1	1e-163	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
Swissprot	Q9LES3	2e-34	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A059ACB5	1e-161	A0A059ACB5_EUCGR; Uncharacterized protein
STRING	XP_010031655.1	1e-162	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM16714	10	12

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-27	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Eucgr.J00637.1.p
Entrez Gene	104421417

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]