PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00796.2.p
Common NameEUGRSUZ_J00796
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 370aa    MW: 39717.6 Da    PI: 6.3785
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00796.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.9e-06330353629
                       HHHHHHHHHHHHHHHHHHHCTSCC CS
               HLH   6 nerErrRRdriNsafeeLrellPk 29 
                       +++Er RR +i +++ +L++l+P+
  Eucgr.J00796.2.p 330 SIAERVRRTKISERIRKLQDLVPN 353
                       689********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.426324369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-6326356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000830.00114328356No hitNo description
Gene3DG3DSA:4.10.280.101.7E-5329357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MESDLQQQRD GRSSNYQPQQ QPNNNNSGLS RFRSAPSSYF KNLLDSCEEF LNRPSSPESE  60
RIFARLMSSS PASGGGGGGG GGNVFGPPMK TEAEVLQPER SSFSSAASSQ NFYQGSSQLQ  120
NQSMDYKVVG SMGMDRSASL KTGNSNSSNL IRQSSSPAGL FSNTNIDGYS ASRSIEDFVG  180
SGAAGESSFS PASRFSNRMN FSSGPPPSSS GKMSPITELG KKSMDINSPE GGDFSEGHGN  240
DYITGFPIGS WDDPVGLSDN FNRGDEDEKG FLGLNASETE EGKGRVPGLL AHHLSLPSKS  300
SADVDKFLQL QDSVPCKVRA KRGFATHPRS IAERVRRTKI SERIRKLQDL VPNMDKVLHF  360
QISGCETEM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00796.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031833.10.0PREDICTED: transcription factor bHLH130 isoform X3
TrEMBLA0A059ABV20.0A0A059ABV2_EUCGR; Uncharacterized protein
STRINGXP_010031830.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.13e-39bHLH family protein