PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.J00796.3.p

Common Name

EUGRSUZ_J00796

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bHLH

Protein Properties

Length: 329aa MW: 35054 Da PI: 4.4228

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.J00796.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.3	1.7e-05	282	307	26	55
TSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 26 llPkaskapskKlsKaeiLekAveYIksLq 55 l+P+ +k + a++L +Av+YIk+Lq Eucgr.J00796.3.p 282 LVPNM----DKQTNTADMLDLAVDYIKELQ 307 56664....6779****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	4.9E-9	280	320	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.04E-5	281	311	No hit	No description
SuperFamily	SSF47459	8.64E-9	281	322	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence Send to blast
MESDLQQQRD GRSSNYQPQQ QPNNNNSGLS RFRSAPSSYF KNLLDSCEEF LNRPSSPESE 60 RIFARLMSSS PASGGGGGGG GGNVFGPPMK TEAEVLQPER SSFSSAASSQ NFYQGSSQLQ 120 NQSMDYKVVG SMGMDRSASL KTGNSNSSNL IRQSSSPAGL FSNTNIDGYS ASRSIEDFVG 180 SGAAGESSFS PASRFSNRMN FSSGPPPSSS GKMSPITELG KKSMDINSPE GGDFSEGHGN 240 DYITGFPIGS WDDPVGLSDN FNRGDEDEKG FLGLNASETE DLVPNMDKQT NTADMLDLAV 300 DYIKELQGQV KTLSDDRAKC TCPSKQQL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.J00796.3.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010031833.1	1e-167	PREDICTED: transcription factor bHLH130 isoform X3
TrEMBL	A0A059ABJ5	0.0	A0A059ABJ5_EUCGR; Uncharacterized protein
STRING	XP_010031830.1	1e-164	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-16	bHLH family protein

Link Out ? help Back to Top
Phytozome	Eucgr.J00796.3.p