PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J01931.1.p
Common NameEUGRSUZ_J01931, LOC104422399
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 385aa    MW: 41757.5 Da    PI: 8.63
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J01931.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.55.1e-05149172123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       ++C+ Cg++F  + +L++H  t H
  Eucgr.J01931.1.p 149 FPCTSCGEVFQKPQLLEQHHATrH 172
                       89*****************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.66149177IPR007087Zinc finger, C2H2
PROSITE patternPS000280151172IPR007087Zinc finger, C2H2
SuperFamilySSF563993.74E-13174383No hitNo description
Gene3DG3DSA:3.90.228.105.8E-5186289IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene3DG3DSA:3.90.228.108.5E-4318383IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MASSGSSPSS SFFGKFRSLL LLLLLHLGCF IFSSSSSSSV SAASTTIKKR KASPAASHFK  60
PRKALSSSWS YLKGILISKP RASHPPTPSL ASARNSQRSI ASLVSPAEAH ALVELTSTPP  120
REKPWPGTLL QEEPDHADLF FPLRNDAIFP CTSCGEVFQK PQLLEQHHAT RHAVSELIGE  180
DSGRNIVQII FQTGWPAGKS LRVLRILKIH HGPRTLSRFE EYRESVKARA ARASRSRDER  240
CVADGNELLR FHCSTFTCDL GQDGNSSICN QQYCNVCGII KSGFSKKLDG ISTLSSGWKA  300
HGTLPDDVVE EFGFMHVKRA MLVCRIIAGR VGSEADDVDK EEGGGFDSVV GQGGSGALTR  360
LDDEDLLVFN PRAVLPCFVI VYTV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J01931.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010033020.10.0PREDICTED: uncharacterized protein LOC104422399
TrEMBLA0A059AFW70.0A0A059AFW7_EUCGR; Uncharacterized protein
STRINGXP_010033020.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79192640
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-100C2H2 family protein