PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K00128.1.p
Common NameEUGRSUZ_K00128
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 349aa    MW: 39528.6 Da    PI: 7.9932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K00128.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.3e-18240289355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrdp+      r++lg+++t  +Aaka++ a+ k++g
  Eucgr.K00128.1.p 240 YRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYDTDVDAAKAYDCAAFKMRG 289
                       9*******.**********8542..4**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.263239297IPR001471AP2/ERF domain
PfamPF008471.1E-12239289IPR001471AP2/ERF domain
SMARTSM003804.2E-36239303IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-31239298IPR001471AP2/ERF domain
CDDcd000181.28E-27240297No hitNo description
PRINTSPR003677.4E-13240251IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-22240298IPR016177DNA-binding domain
PRINTSPR003677.4E-13279299IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MSISFHCSQS CLLNTAIMRT SPGEDRDRRN RQLFTRGVAR WAIQQTTCSN LPRFLSYKDK  60
KGTANDSQRT RILRAQIRLL SLCNSERIRS VHADPKLAHL IHRSPLERPD SFACCKTVVL  120
HLFVRKQSRI DYGVIYSSFL MDSSFSEMAE LDESSTLELI TQYLLEDSIN LAQLQPVKTE  180
NLFLDPGPDS PDSDHPTWQD LETPNLEIKA EPITLESPES ELGSPEKNQD EAGSAAKASY  240
RGVRRRPWGK YAAEIRDPTR KGSRVWLGTY DTDVDAAKAY DCAAFKMRGR KAILNFPLEA  300
GKSAPPPNPG RKRRRVAVKK EESKENLEDW PIEMLAQAER GEDEWTQC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-24234299974Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310314RKRRR
2311315KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K00128.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038413.11e-145PREDICTED: ethylene-responsive transcription factor ERF106
TrEMBLA0A058ZWQ00.0A0A058ZWQ0_EUCGR; Uncharacterized protein
STRINGXP_010038413.11e-145(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM32292766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.14e-37ERF family protein