PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K01037.1.p
Common NameEUGRSUZ_K01037
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 216aa    MW: 24038.5 Da    PI: 9.9902
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K01037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102376155
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                      rr+  +++E++RR+r+++ ++ L +llP+ +   +++   s  +   +A++YIk L+
  Eucgr.K01037.1.p 23 RRTERKIIEKNRRNRMKHLYSVLNSLLPSqP---SAQEaKSLPDQIDEAIRYIKGLE 76
                      79999************************55...344446777***********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.39E-62080No hitNo description
SuperFamilySSF474599.03E-112195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.7062275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.6E-102392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-72376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-52881IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MALSLLNAIG KEMERGRQPS SPRRTERKII EKNRRNRMKH LYSVLNSLLP SQPSAQEAKS  60
LPDQIDEAIR YIKGLETAVK EAKDKKENLM GKKRPSPSTS SNTLAAITSA KIEIRVRDSS  120
LEVTLTSGLH DKFIFSEILR ILHEEKVEVL NVNFSVVGNS VYHLVHAKIG ESALGAAMIS  180
QRLKTFVYGA ATDGGHEEFH PNLWDCGLSS NIWNF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K01037.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720370.11e-156PREDICTED: uncharacterized protein LOC108955971
TrEMBLA0A058ZZB71e-157A0A058ZZB7_EUCGR; Uncharacterized protein
STRINGXP_010038678.11e-130(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-28bHLH family protein