PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K01643.1.p
Common NameEUGRSUZ_K01643
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 285aa    MW: 30954.9 Da    PI: 7.6332
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K01643.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-10165205545
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Eucgr.K01643.1.p 165 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 205
                       788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-8161224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415163207IPR004827Basic-leucine zipper domain
PfamPF001701.8E-7165205IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-7165208No hitNo description
Gene3DG3DSA:1.20.5.1708.0E-8166210No hitNo description
PROSITE patternPS000360168183IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MPSFVPATPA SNSIGSEGNV VQSNQNTDFG SFEHSLGFRI EDAINLSRTD PVFNQIKPNG  60
RALGTDIQAR AFNKSVVASE RDQSSTASAS QRIPLQKESQ PNLLSIPGGH SENWGDSNMA  120
DTSPRTDSSS DDTDDRNQRL EAGPSAALGA SDSSGRSKEK AVDQKTLRRL AQNREAARKS  180
RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISSSGD QSHSSNGNGA MAFDVEYARW  240
LEEQNRHINE LRSAVNSHEC GRLQQSGVSC GLVASVLLSF LSFS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K01643.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036354.10.0PREDICTED: transcription factor TGA2.3 isoform X1
SwissprotQ415584e-86HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A059A2I20.0A0A059A2I2_EUCGR; Uncharacterized protein
STRINGXP_010036354.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.59e-37TGACG motif-binding factor 6