PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02069.1.p
Common NameEUGRSUZ_K02069
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 184aa    MW: 20244.6 Da    PI: 7.1648
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02069.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.75.2e-172879156
               AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                      + ykGVr++  +g+Wv+eIr p   +  r+r ++g+f ++e+Aa+a++ a+ +l+ge
  Eucgr.K02069.1.p 28 PVYKGVRQR--NGKWVCEIRQP---NsARTRLWIGTFTSPEMAARAYDVAAVALRGE 79
                      68****975..6*********9...4456*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-112879IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-282987IPR001471AP2/ERF domain
PROSITE profilePS5103220.0862986IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-182987IPR016177DNA-binding domain
SMARTSM003809.8E-292992IPR001471AP2/ERF domain
CDDcd000181.26E-253088No hitNo description
PRINTSPR003673.0E-73041IPR001471AP2/ERF domain
PRINTSPR003673.0E-76888IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MHSSQQQQPH PLQKRKAGRK KFHETRHPVY KGVRQRNGKW VCEIRQPNSA RTRLWIGTFT  60
SPEMAARAYD VAAVALRGES ASLNFPELNA HDEGAGSFFT SSPSSSPSSS SSVARLGSEE  120
KNVRESNGLV LRTASFVDEE ELFNMPGLLD SMAEGLMLTP PATVSGFDWD DVDVHGSDTL  180
WLR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1327861272Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02069.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038979.11e-111PREDICTED: dehydration-responsive element-binding protein 1F
TrEMBLA0A059A4T91e-133A0A059A4T9_EUCGR; Uncharacterized protein
STRINGXP_010038979.11e-110(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35528187
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-33C-repeat-binding factor 4