PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02071.1.p
Common NameEUGRSUZ_K02071
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 195aa    MW: 20635 Da    PI: 5.3667
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02071.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-182373155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      + y+GVr+++ +g+Wv+eIr+p     r  +r++lg+f t+e+Aa a++ a++ l+g
  Eucgr.K02071.1.p 23 PVYRGVRRRS-SGKWVSEIREP-----RkpTRIWLGTFPTPEMAAIAYDVAALTLKG 73
                      68*****888.8*********9.....448***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.7E-122373IPR001471AP2/ERF domain
PROSITE profilePS5103222.6822481IPR001471AP2/ERF domain
SMARTSM003806.1E-342487IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-212483IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.1E-302482IPR001471AP2/ERF domain
PRINTSPR003671.7E-82536IPR001471AP2/ERF domain
CDDcd000185.73E-302583No hitNo description
PRINTSPR003671.7E-84763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MRMEGSRGSG SGTQSPAASG RHPVYRGVRR RSSGKWVSEI REPRKPTRIW LGTFPTPEMA  60
AIAYDVAALT LKGPEAELNF PASVASLPTP ASSSPRDIQA AAASAAAAAG AARDALRPTR  120
LVQGEGQGQA SSERRLEGNA SGNVNEFVDE EMIFNMPNVL ANMAEGMLLS PPRLEVDSTP  180
GPENTEDQDL WKFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-161886168ATERF1
3gcc_A4e-161886168ATERF1
5wx9_A2e-15481372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02071.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036724.11e-135PREDICTED: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR07e-54ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A059A2K11e-136A0A059A2K1_EUCGR; Uncharacterized protein
STRINGXP_010036724.11e-135(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM64242546
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.11e-54ERF family protein