PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02109.1.p
Common NameEUGRSUZ_K02109, LOC104425693
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 522aa    MW: 56277.3 Da    PI: 6.6466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02109.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.4e-09342389455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Eucgr.K02109.1.p 342 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 389
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.21E-10336393No hitNo description
SuperFamilySSF474598.77E-17336406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663338388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-16338404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-6342389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10344394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MDNEFFMPWQ PLSSGMAIQP NDLNCASKQS PDCFFNPNWD NSSADQGGHF ESALSSMVSS  60
PAAAGSYLSN ESVLIRELIG KLGSIGNPGE ASPSPHSLPL SGNATAAMPY IGGSNSTNTS  120
CYNTPLNSPP DRAVKERFSS VAEFTADPGF AERAARFSCF GSRSFNGRTS QFSLNNGEPP  180
YKSNPLMESG KFQRVLSSPS LKALGSQAVA TVQQNVISRL SDRIELTNSN EESSVSEQIP  240
GGENGLKASN EANSRKRKAA AKGKAKESAP STPVANAMKV SESHDNSSPK RCKPNEDDGN  300
GNDTAKGEDD AKGNSKKNDA KPPEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKL  360
LQDLVPGCNK VTGKALMLDE IINYVQSLQR QVEFLSMKLA SVNTTLDFNA DALMSKDMFQ  420
PNNSVPRPMF PLDSSATAFH GHHRPQNQPL PPPLQGHVSS GTATQVEPLN LGPCHTVESH  480
SPLNDLQYQN FCGDDLQSIV QMSFGQNSNQ ETAFQLQTFH G*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02109.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036765.10.0PREDICTED: transcription factor bHLH62
TrEMBLA0A059A4Z60.0A0A059A4Z6_EUCGR; Uncharacterized protein
STRINGXP_010036765.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23322775
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-103bHLH family protein