PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02940.2.p
Common NameEUGRSUZ_K02940
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 543aa    MW: 59173.9 Da    PI: 7.4191
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02940.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.42.5e-32209265259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK+vkgse+prsYY+Ct++ Cp+kkkvers  +++++ei+Y+g+Hnh 
  Eucgr.K02940.2.p 209 DDGYNWRKYGQKQVKGSENPRSYYKCTHPACPTKKKVERSL-EGHITEIVYKGTHNHA 265
                       8****************************************.***************7 PP
2WRKY104.46e-33371429159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++prsYY+Ct+agCpv+k+ver+++d ++v++tYeg+Hnh+
  Eucgr.K02940.2.p 371 LDDGYRWRKYGQKVVKGNHNPRSYYKCTYAGCPVRKHVERASNDMRAVITTYEGKHNHD 429
                       59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081122.756203267IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.7E-28203267IPR003657WRKY domain
SuperFamilySSF1182902.09E-24204267IPR003657WRKY domain
SMARTSM007742.3E-34208266IPR003657WRKY domain
PfamPF031061.8E-24209264IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.9E-37356431IPR003657WRKY domain
SuperFamilySSF1182901.7E-29363431IPR003657WRKY domain
PROSITE profilePS5081136.862366431IPR003657WRKY domain
SMARTSM007744.1E-38371430IPR003657WRKY domain
PfamPF031061.7E-25372429IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MKSSFTDLLN GSMGMDNNHW AFSGTAPTAN VSMEAPKYRS TAPPSLPLSP PPISPSGFLT  60
FPPGLSPSDF LDSPLLFSSS NVESPTVGAF AGEAASWRSG GGGFGGAFKG EEKLFSDFSF  120
QPHQSRPTAA ATAAPSSMPQ SSSAMVSVTD VLPEKRGRET SEFARIQNSA IPASQTSTQS  180
LTPPSETLPA NANTNPHPSY LIREQKKSDD GYNWRKYGQK QVKGSENPRS YYKCTHPACP  240
TKKKVERSLE GHITEIVYKG THNHAKPLST RRSSSQSIQP QSSSTAYLEN PDRLAMVLSE  300
NGQQDSSASM GDEDFEENSQ MSNSAGDDDG SEPEAKRLRG ENEYESYAAS GNRTVREPRV  360
VVQTMSEIDI LDDGYRWRKY GQKVVKGNHN PRSYYKCTYA GCPVRKHVER ASNDMRAVIT  420
TYEGKHNHDV PAPRGSSTQY VNRPQPSNNS SSIAPMPIRP STVAGHSNNS TYLSSIENTR  480
FQRSGNHAPF TLQMLQSSDS YGAVGSGKQG GSYMNQTPNW DDMFARTKEE PRDGSEFDSF  540
LN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-35209432878Probable WRKY transcription factor 4
2lex_A6e-35209432878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02940.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037657.10.0PREDICTED: probable WRKY transcription factor 33
TrEMBLA0A059A7T20.0A0A059A7T2_EUCGR; Uncharacterized protein
STRINGXP_010037657.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-112WRKY DNA-binding protein 33