PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.L02041.1.p
Common NameEUGRSUZ_L02041
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 200aa    MW: 22168 Da    PI: 8.1828
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.L02041.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.22e-1387136355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       y GV  ++ +g++ A+Ir+ps+n+  k+++lg+f t  +Aa+a+  a++k++ 
  Eucgr.L02041.1.p  87 YIGVQKKP-WGSFGARIRVPSQNN--KQIWLGSFKTDIDAARAYNIAALKYHR 136
                       889*8777.***********9986..*************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.25E-1785141No hitNo description
SMARTSM003801.1E-1486149IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-1686136IPR001471AP2/ERF domain
PROSITE profilePS5103216.33186144IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-1387137IPR016177DNA-binding domain
PRINTSPR003673.4E-58798IPR001471AP2/ERF domain
PRINTSPR003673.4E-5110126IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MKIAWCFLLN GPGWGPVGRL YHFLSPPEFV FGLDANTVDS LCHSHSASTL SLLNLPQAPS  60
EMKASKTLQS PKVAVPSSNQ ARRKQNYIGV QKKPWGSFGA RIRVPSQNNK QIWLGSFKTD  120
IDAARAYNIA ALKYHRNPTL NVLPDGKEED VEGDYKDIVK KEEPGGDYKD IVKKEEPGGD  180
YKDIVKKEES GGDYEEVYP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.L02041.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041306.28e-96PREDICTED: ethylene-responsive transcription factor ERF107
RefseqXP_018722577.18e-96PREDICTED: ethylene-responsive transcription factor ERF107
TrEMBLA0A058ZRP61e-146A0A058ZRP6_EUCGR; Uncharacterized protein
STRINGXP_010041306.11e-92(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.18e-18ethylene responsive element binding factor 2