PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.L02499.1.p
Common NameEUGRSUZ_L02499
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 131aa    MW: 15262.6 Da    PI: 10.5839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.L02499.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.44e-211111227121
               NAM  27 kleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgr 112
                       + ++e++i+evd++++ PwdLp k     ++k++ +ew+ Fs+ ++ky+++k ++r+ + g Wk tgk +++ ++ ++++ glkk+Lvf k +
  Eucgr.L02499.1.p  11 E-TVEQIIPEVDVHQLPPWDLPgKinelsRIKSDGDEWFLFSRLQNKYPQSKWARRTNDYGSWKPTGKPHKIRTQdRKNTLGLKKILVFKKCQ 102
                       3.34578***************54788887778899*********************9**************99977888**********886 PP

               NAM 113 apk.gektdW 121
                       +pk ++  +W
  Eucgr.L02499.1.p 103 SPKkAHIPNW 112
                       6650445666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.1091130IPR003441NAC domain
SuperFamilySSF1019415.49E-207113IPR003441NAC domain
PfamPF023655.3E-531105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MDRTLKTLGN ETVEQIIPEV DVHQLPPWDL PGKINELSRI KSDGDEWFLF SRLQNKYPQS  60
KWARRTNDYG SWKPTGKPHK IRTQDRKNTL GLKKILVFKK CQSPKKAHIP NWYCMNTVSS  120
MIRVTSFFTT *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.L02499.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064391.15e-64PREDICTED: protein NTM1-like 9
RefseqXP_010064501.15e-64PREDICTED: protein NTM1-like 9
RefseqXP_018725712.15e-64PREDICTED: protein NTM1-like 9
TrEMBLA0A058ZQP52e-92A0A058ZQP5_EUCGR; Uncharacterized protein
STRINGXP_010064391.12e-63(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.29e-20NAC 014