PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.L02501.1.p
Common NameEUGRSUZ_L02501
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 161aa    MW: 17919.9 Da    PI: 4.3129
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.L02501.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.91.1e-1153796128
               NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++e +g+kktLvfy+gr pkg++t+Wv hey+l
  Eucgr.L02501.1.p   5 TDEPIGIKKTLVFYTGRMPKGKRTNWVSHEYHL 37 
                       56789***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.984160IPR003441NAC domain
SuperFamilySSF1019414.45E-12560IPR003441NAC domain
PfamPF023651.7E-4937IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MSEDTDEPIG IKKTLVFYTG RMPKGKRTNW VSHEYHLNPK CLGQNENEML PYVACRIKNK  60
KEKKLMMGHA PTVSPEVYSS SLHAYTSNAS ETPVNQEGDY SSFCISPNDE VADDQEAVDA  120
QPEISVGELM ESLPPLQPLD DILSDCNTTL TYYPQAGTEE G
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.L02501.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041775.11e-117PREDICTED: protein NTM1-like 9
TrEMBLA0A058ZRM71e-117A0A058ZRM7_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010041775.11e-117(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3522322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.21e-14NAC transcription factor-like 9