PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.L02695.1.p
Common NameEUGRSUZ_G01073
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 157aa    MW: 17958.4 Da    PI: 7.1129
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.L02695.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.41.1e-2691332128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                       p+G+rF+Pt++elv ++L+kk++g+  ++  vi+e++iy++eP +L +      ++ ++ +e++fF++r +k        r+t  g+Wk+t +
  Eucgr.L02695.1.p   9 PVGLRFKPTEDELVGHHLTKKLRGEMETI-CVIPELHIYNWEPPELFArynelsSIPSDGSECFFFCPRGRK--------RKTPCGFWKETST 92 
                       89**********************99777.78**************743555555555888*******9885........77999******** PP

               NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ +++  + e++gl+++Lv++kgr++++++t+  mh y+l
  Eucgr.L02695.1.p  93 KRVIKAPdSAEEMGLRRSLVYHKGRQRDAHRTNLGMHIYNL 133
                       999999867778*************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-285138IPR003441NAC domain
PROSITE profilePS5100528.3298149IPR003441NAC domain
PfamPF023654.5E-189133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MAESMEAWPV GLRFKPTEDE LVGHHLTKKL RGEMETICVI PELHIYNWEP PELFARYNEL  60
SSIPSDGSEC FFFCPRGRKR KTPCGFWKET STKRVIKAPD SAEEMGLRRS LVYHKGRQRD  120
AHRTNLGMHI YNLNSNVSDS EILDPVLDFS SFASPN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-1421339140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.L02695.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010041979.11e-115PREDICTED: protein NTM1-like 9
TrEMBLA0A059BBR21e-112A0A059BBR2_EUCGR; Uncharacterized protein
STRINGXP_010041979.11e-114(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16613212
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-29NAC transcription factor-like 9