PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000378_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 201aa    MW: 23030.6 Da    PI: 6.054
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000378_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.5e-1662122363
                                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                       +++re+rkq+NRe+A+rsR R+++e+e+L+e ++ L +e ++L +el +l++e+ kl+ ++
  FANhyb_icon00000378_a.1.g00001.1  62 RRRREKRKQSNRESAKRSRFRRQQECEKLRETAEMLNSEISELPNELRRLSEECGKLDEKN 122
                                       579*******************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-1157124IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-1257120No hitNo description
PfamPF001703.5E-1262122IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.01362125IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-964118No hitNo description
CDDcd147028.24E-1565115No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MFNQIDQETA VQNNSRVLYS GTNTDLNLLN IGVHMPETHL NLGMDLNVSS VYAIRTEEDH  60
DRRRREKRKQ SNRESAKRSR FRRQQECEKL RETAEMLNSE ISELPNELRR LSEECGKLDE  120
KNSSLIDEME KMYGPDAVAD LRAVKVNSSD DGSNSIESKP PRRDNSTSPT PSHRNEIFPT  180
PPHRIEASPT PLEPRLFGVT L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16065DRRRRE
26166RRRREK
36169RRRREKRKQ
46268RRREKRK
56269RRREKRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024167114.11e-110G-box-binding factor 1-like
TrEMBLA0A2P6PNU41e-108A0A2P6PNU4_ROSCH; Putative transcription factor bZIP family
STRINGXP_004289625.13e-80(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1575779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.13e-17G-box binding factor 1