PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000456_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 145aa    MW: 16419.7 Da    PI: 5.293
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000456_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.59.6e-12114135223
                                       --SS-EEEEEEE--TT-SS-EE CS
                              WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                                       dDgy+WrKYGqK++k+s++pr+
  FANhyb_icon00000456_a.1.g00001.1 114 DDGYKWRKYGQKSIKNSPNPRA 135
                                       8********************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-10106135IPR003657WRKY domain
PROSITE profilePS5081112.622108135IPR003657WRKY domain
SuperFamilySSF1182903.92E-9109135IPR003657WRKY domain
SMARTSM007742.2E-4113145IPR003657WRKY domain
PfamPF031061.1E-7114135IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MEEAMSTNWT VGFEEELVRE LLDNESPFFV LPEEAIEYPQ MSVSGKEGLN RFVQNVYSGP  60
TIHDIETALS VTTGITVQPQ ELSQARLSIL ERGLSKVEHK YTLKIKSCDT GMADDGYKWR  120
KYGQKSIKNS PNPRAKSFSQ LLMKV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004302766.12e-94PREDICTED: probable WRKY transcription factor 49
TrEMBLA0A2P6R9Y32e-80A0A2P6R9Y3_ROSCH; Putative transcription factor WRKY family
STRINGXP_004302766.16e-94(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71183449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-28WRKY DNA-binding protein 49