PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00000785_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Protein Properties

Length: 173aa MW: 19645.6 Da PI: 9.5678

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00000785_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.7	1.6e-11	48	155	2	97
EEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TT CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesg.rsWevkliyrkksgryvltkG 64 +k+lt sd + ++rl +pk+ +++ + + t+t++d++ + e+ ++y+ + ++yvl+++ FANhyb_icon00000785_a.1.g00001.1 48 KKKLTVSDLGDLSRLLVPKTLTQKKvlplmnksldervH--SSDGGTVTVYDSDMkTKHELVFKYWPSCKSYVLQAN 122 689999***************9999999987776431..225569999998886677888888************ PP HH.HHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 65 Wk.eFvkangLkegDfvvFkldgr.sefelvvkvf 97 Wk eFv+ +LkegD + ++ d r s f v++++ FANhyb_icon00000785_a.1.g00001.1 123 WKkEFVNVRKLKEGDLIGLYWDARsSAF--VFSLL 155 737***************98775655..77666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101936	5.1E-16	43	161	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	1.2E-16	45	157	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	6.09E-16	45	155	No hit	No description
SMART	SM01019	8.6E-4	47	158	IPR003340	B3 DNA binding domain
Pfam	PF02362	4.1E-8	49	155	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence Send to blast
MAETLLFPSL FASTRVQDQP CHLSQADNRG LDLGLSLGSI DYDPWTIKKK LTVSDLGDLS 60 RLLVPKTLTQ KKVLPLMNKS LDERVHSSDG GTVTVYDSDM KTKHELVFKY WPSCKSYVLQ 120 ANWKKEFVNV RKLKEGDLIG LYWDARSSAF VFSLLQRALK IDTTVGTVGY WRN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011461356.1	1e-116	PREDICTED: B3 domain-containing protein At2g33720-like
TrEMBL	A0A059C5V8	7e-34	A0A059C5V8_EUCGR; Uncharacterized protein
STRING	XP_004295728.1	1e-103	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF579	12	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33720.1	1e-21	B3 family protein